STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462700SIN3 transcription regulator family member Ab. (1299 aa)    
Predicted Functional Partners:
Arid4a
Tudor domain-containing protein.
   
 0.932
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.932
suds3
SDS3 homolog, SIN3A corepressor complex component.
   
 0.909
phf12
PHD finger protein 12b.
   
 
 0.889
ing1
Inhibitor of growth protein.
   
 
 0.833
sap30l
Sap30-like.
    
 0.829
LOC103462110
MRG domain-containing protein.
   
 0.816
LOC103466532
Mortality factor 4 like 1.
   
 0.816
mecp2
Methyl CpG binding protein 2.
    
 0.803
ENSPREP00000004470
Uncharacterized protein.
   
 0.791
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.