STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103465711Protein phosphatase 1, regulatory subunit 15B. (553 aa)    
Predicted Functional Partners:
LOC103464252
PP1c_bdg domain-containing protein.
     
0.573
LOC103473984
CBM21 domain-containing protein.
     
  0.540
ENSPREP00000001430
Protein phosphatase 1, regulatory subunit 3Db.
     
  0.540
ENSPREP00000004127
CBM21 domain-containing protein.
     
  0.540
Ppp1r3b
Protein phosphatase 1 regulatory subunit.
     
  0.540
ENSPREP00000010103
Protein phosphatase 1 regulatory subunit.
     
  0.540
ENSPREP00000011280
Zgc:77112.
     
  0.540
ppp1r3g
Si:ch211-152c8.5.
     
  0.540
Ppp1r3a
CBM21 domain-containing protein.
     
  0.540
ENSPREP00000017971
CBM21 domain-containing protein.
     
  0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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