ENSPREP00000006855 protein (Poecilia reticulata)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSPREP00000006855

Uncharacterized protein. (666 aa)

Predicted Functional Partners:

Dync1h1

0.963

LOC103472281

0.962

dync1li2

0.962

DYNC1I1

0.954

LOC103458526

0.954

LOC103479324

0.954

Dnah3

0.924

ENSPREP00000025896

0.924

ENSPREP00000019813

0.900

LOC103479331

0.900

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DYNC1I1	ENSPREP00000006855	ENSPREP00000003078	ENSPREP00000006855	Dynein cytoplasmic 1 intermediate chain 1.	Uncharacterized protein.	0.954
DYNC1I1	ENSPREP00000019813	ENSPREP00000003078	ENSPREP00000019813	Dynein cytoplasmic 1 intermediate chain 1.	AAA_6 domain-containing protein.	0.569
DYNC1I1	LOC103458526	ENSPREP00000003078	ENSPREP00000006277	Dynein cytoplasmic 1 intermediate chain 1.	Dynein, cytoplasmic 1, intermediate chain 2a.	0.901
DYNC1I1	LOC103472281	ENSPREP00000003078	ENSPREP00000005810	Dynein cytoplasmic 1 intermediate chain 1.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.985
DYNC1I1	LOC103479324	ENSPREP00000003078	ENSPREP00000020641	Dynein cytoplasmic 1 intermediate chain 1.	Dynein, cytoplasmic 1, intermediate chain 2b.	0.901
DYNC1I1	LOC103479331	ENSPREP00000003078	ENSPREP00000019914	Dynein cytoplasmic 1 intermediate chain 1.	Uncharacterized protein.	0.569
DYNC1I1	dync1li2	ENSPREP00000003078	ENSPREP00000033188	Dynein cytoplasmic 1 intermediate chain 1.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.985
Dnah3	Dync1h1	ENSPREP00000001836	ENSPREP00000006912	AAA_6 domain-containing protein.	Dynein_C domain-containing protein.	0.851
Dnah3	ENSPREP00000006855	ENSPREP00000001836	ENSPREP00000006855	AAA_6 domain-containing protein.	Uncharacterized protein.	0.924
Dnah3	ENSPREP00000025896	ENSPREP00000001836	ENSPREP00000025896	AAA_6 domain-containing protein.	AAA_6 domain-containing protein.	0.935
Dnah3	LOC103472281	ENSPREP00000001836	ENSPREP00000005810	AAA_6 domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.500
Dnah3	LOC103479331	ENSPREP00000001836	ENSPREP00000019914	AAA_6 domain-containing protein.	Uncharacterized protein.	0.944
Dnah3	dync1li2	ENSPREP00000001836	ENSPREP00000033188	AAA_6 domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.500
Dync1h1	Dnah3	ENSPREP00000006912	ENSPREP00000001836	Dynein_C domain-containing protein.	AAA_6 domain-containing protein.	0.851
Dync1h1	ENSPREP00000006855	ENSPREP00000006912	ENSPREP00000006855	Dynein_C domain-containing protein.	Uncharacterized protein.	0.963
Dync1h1	ENSPREP00000025896	ENSPREP00000006912	ENSPREP00000025896	Dynein_C domain-containing protein.	AAA_6 domain-containing protein.	0.650
Dync1h1	LOC103472281	ENSPREP00000006912	ENSPREP00000005810	Dynein_C domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.495
Dync1h1	dync1li2	ENSPREP00000006912	ENSPREP00000033188	Dynein_C domain-containing protein.	Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes.	0.495
ENSPREP00000006855	DYNC1I1	ENSPREP00000006855	ENSPREP00000003078	Uncharacterized protein.	Dynein cytoplasmic 1 intermediate chain 1.	0.954
ENSPREP00000006855	Dnah3	ENSPREP00000006855	ENSPREP00000001836	Uncharacterized protein.	AAA_6 domain-containing protein.	0.924