STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zmynd10Zinc finger, MYND-type containing 10. (430 aa)    
Predicted Functional Partners:
ENSPREP00000031125
Leucine rich repeat containing 6.
     
 0.927
Unc79
Uncharacterized protein.
   
 0.878
LOC103474427
Dynein assembly factor 1, axonemal.
  
 
 0.842
nprl2
NPR2 like, GATOR1 complex subunit.
 
    
 0.836
dnaaf4
Dynein axonemal assembly factor 4.
   
 0.789
Ttc9c
Tetratricopeptide repeat domain 9C.
    
 0.786
dnali1
Dynein, axonemal, light intermediate chain 1.
   
  
 0.781
dnaaf3
Dynein, axonemal, assembly factor 3 like.
   
  
 0.780
ENSPREP00000017751
Dynein_attach_N domain-containing protein.
   
  
 0.771
IFT43
Intraflagellar transport 43.
    
 0.765
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.