STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zmynd10Zinc finger, MYND-type containing 10. (430 aa)    
Predicted Functional Partners:
Unc79
Uncharacterized protein.
   
 0.989
nprl2
NPR2 like, GATOR1 complex subunit.
 
    
 0.803
ENSPREP00000031125
Leucine rich repeat containing 6.
    
 0.730
wdr35
WD repeat-containing protein 35.
    
 0.661
LOC103474427
Dynein assembly factor 1, axonemal.
  
 
 0.658
IFT122
Intraflagellar transport 122.
   
 0.657
rsph1
Uncharacterized protein.
   
 
 0.648
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
 
 0.645
armc4
Armadillo repeat containing 4.
   
  
 0.642
mapk7
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 
 0.639
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.