STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP000000068962-epi-5-epi-valiolone synthase. (303 aa)    
Predicted Functional Partners:
rad51
RAD51 recombinase.
   
 
 0.841
cpvl
Carboxypeptidase vitellogenic like; Belongs to the peptidase S10 family.
    
   0.791
rad51d
RAD51 paralog D.
   
 
 0.786
IDNK
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
     
 0.771
AANAT
Arylalkylamine N-acetyltransferase 1.
      
 0.766
mdfic
MyoD family inhibitor domain containing.
      
 0.762
ntpcr
Nucleoside-triphosphatase, cancer-related.
    
  0.760
ruvbl2
RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding.
    
   0.728
LOC103465591
Zgc:113054.
  
 
 0.689
bdh2
3-hydroxybutyrate dehydrogenase, type 2.
  
 
 0.689
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.