STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
wsb2WD repeat and SOCS box containing 2. (419 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.937
kansl3
KAT8 regulatory NSL complex subunit 3.
    
 0.911
rbbp5
Retinoblastoma binding protein 5.
   
 0.899
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.894
kat14
Lysine acetyltransferase 14.
    
 0.887
sgf29
SAGA complex associated factor 29.
    
 0.875
cul5
Cullin 5; Belongs to the cullin family.
    
 0.873
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.873
dr1
Down-regulator of transcription 1.
   
 0.868
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
  0.860
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.