STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000006911Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
dna2
Uncharacterized protein.
   
 0.869
LOC103482091
Essential meiotic structure-specific endonuclease 1.
   
 0.856
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.851
rmi2
RecQ mediated genome instability 2.
   
 
 0.841
slx4
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).
  
 0.823
rmi1
RMI1, RecQ mediated genome instability 1, homolog (S. cerevisiae).
   
 
 0.814
rad50
RAD50 homolog, double strand break repair protein.
  
 0.784
exo1
Exonuclease 1.
   
 
 0.784
rad51
RAD51 recombinase.
  
 0.780
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.770
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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