STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466705Si:ch1073-390k14.1. (634 aa)    
Predicted Functional Partners:
timeless
Timeless circadian clock.
    
 0.864
LOC103475715
Neuronal PAS domain protein 2.
   
 0.838
arntl
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.820
LOC103480497
Period circadian clock 1b.
   
 0.805
fbxl15
F-box and leucine-rich repeat protein 15.
   
 0.790
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.763
LOC103466090
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.763
LOC103479643
Period circadian clock 2.
   
 0.744
per3
Period circadian clock 3.
   
 0.744
PER2
Period circadian regulator 2.
   
 0.744
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.