Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467660Fork-head domain-containing protein. (579 aa)    
Predicted Functional Partners:
frmd4b
FERM domain containing 4Bb.
      
 0.758
LOC103465525
FERM domain containing 4Ba.
      
 0.574
LOC103481195
Calcium release activated channel regulator 2A.
      
 0.532
prdm14
PR domain containing 14.
    
 0.504
runx3
Runt-related transcription factor.
    
 0.483
LOC103457845
Runt-related transcription factor.
    
 0.483
LOC103477443
Runt-related transcription factor.
    
 0.483
frmd4a
FERM domain containing 4A.
      
 0.478
mdfic2
Uncharacterized protein.
      
 0.473
LOC103476608
Runt domain-containing protein.
    
 0.468
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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