Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rfc5Replication factor C (activator 1) 5. (335 aa)    
Predicted Functional Partners:
rfc2
Replication factor C (activator 1) 2.
   
0.999
rfc1
Replication factor C subunit 1.
   
0.999
rfc3
Replication factor C (activator 1) 3.
   
0.999
rfc4
Replication factor C (activator 1) 4.
  
0.999
dscc1
DNA replication and sister chromatid cohesion 1.
   
 0.995
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.995
chtf8
CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae).
   
 0.995
ENSPREP00000000518
CTF18, chromosome transmission fidelity factor 18 homolog (S. cerevisiae).
   
 0.994
atad5
ATPase family AAA domain containing 5a.
   
 0.994
rad17
RAD17 checkpoint clamp loader component.
    
 0.989
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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