STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462187Synaptic vesicle glycoprotein 2Ba. (696 aa)    
Predicted Functional Partners:
lamc1
Laminin, gamma 1.
     
 0.686
LOC103473396
Laminin, gamma 3.
     
 0.686
lamb3
Uncharacterized protein.
     
 0.682
lama5
Laminin, alpha 5.
     
 0.667
lama4
Laminin, alpha 4.
     
 0.667
LAMB1
Laminin, beta 1a.
     
 0.662
Lamb2
Laminin, beta 2 (laminin S).
     
 0.662
LOC103459158
Laminin, beta 1b.
     
 0.659
ENSPREP00000005143
Laminin N-terminal domain-containing protein.
   
 
  0.656
Lama2
Laminin_I domain-containing protein.
     
 0.656
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.