STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fbxo48F-box protein 48. (153 aa)    
Predicted Functional Partners:
phf12
PHD finger protein 12b.
      
 0.907
LOC103476468
Cannabinoid receptor interacting protein 1b.
      
 0.726
fbxo47
F-box domain-containing protein.
      
 0.711
cnbp
CCHC-type zinc finger, nucleic acid binding protein a.
      
 0.685
ect2l
Coiled-coil domain containing 28A.
      
 0.670
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
    
 
 0.628
LOC103472005
Uncharacterized protein.
    
 
 0.618
fbxl22
F-box and leucine-rich repeat protein 22.
      
 0.605
anapc15
Anaphase promoting complex subunit 15.
      
 0.602
pno1
Partner of NOB1 homolog.
      
 0.597
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.