STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103481534Synuclein, gamma b (breast cancer-specific protein 1); Belongs to the synuclein family. (234 aa)    
Predicted Functional Partners:
sncaip
Synuclein, alpha interacting protein.
    
 0.787
sncb
Synuclein, beta; Belongs to the synuclein family.
   
 
 0.784
ENSPREP00000020277
RBR-type E3 ubiquitin transferase.
    
 
 0.711
park7
Parkinson protein 7.
    
 
 0.662
TPPP
Tubulin polymerization promoting protein.
   
 
 0.611
LOC103477848
Apolipoprotein Eb.
    
 0.594
LOC103473017
Apolipoprotein Ea.
    
 0.594
LOC103475461
Crystallin, alpha B, a; Belongs to the small heat shock protein (HSP20) family.
    
 
 0.593
stub1
STIP1 homology and U-Box containing protein 1.
    
 
 0.584
nbr1
NBR1 autophagy cargo receptor a.
    
 
 0.582
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]