STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472014Uncharacterized protein. (209 aa)    
Predicted Functional Partners:
nfatc1
Nuclear factor of activated T cells 1.
    
 0.986
LOC103460345
Nuclear factor of activated T cells 1.
    
 0.986
nfatc2
Nuclear factor of activated T cells 2a.
    
 0.982
LOC103465668
RHD domain-containing protein.
    
 0.973
nfatc3
Nuclear factor of activated T cells 3a.
    
 0.973
calm2
Calmodulin 2a (phosphorylase kinase, delta); Belongs to the calmodulin family.
    
0.972
wdr92
WD repeat domain 92.
 
 
 
 0.962
ENSPREP00000016362
RHD domain-containing protein.
    
 0.929
tfeb
Transcription factor EB.
     
 0.910
LOC103471056
Serine/threonine-protein phosphatase.
   
 0.854
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.