STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sigmar1Sigma non-opioid intracellular receptor 1. (222 aa)    
Predicted Functional Partners:
LOC103471399
Phosphoethanolamine methyltransferase.
   
 0.973
LOC103472487
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 
 0.959
sqle
Squalene epoxidase a.
   
 
 0.958
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.954
sc5d
Sterol-C5-desaturase; Belongs to the sterol desaturase family.
   
 0.939
dhcr7
7-dehydrocholesterol reductase.
   
 
 0.827
tm7sf2
Transmembrane 7 superfamily member 2.
   
 
 0.827
ENSPREP00000029984
Tudor domain-containing protein.
   
 
 0.827
Lbr
Uncharacterized protein.
   
 
 0.827
LOC103477979
Hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1; Belongs to the 3-beta-HSD family.
   
 
 0.796
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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