STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103476576BTB domain-containing protein. (556 aa)    
Predicted Functional Partners:
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.854
cops5
COP9 signalosome subunit 5.
    
  0.831
cops2
COP9 signalosome subunit 2.
    
 0.823
gps1
G protein pathway suppressor 1.
   
  0.816
cops3
COP9 signalosome subunit 3.
    
  0.795
ENSPREP00000020872
Uncharacterized protein.
    
  0.786
cops7a
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 0.778
COPS6
COP9 signalosome subunit 6.
    
  0.763
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.748
LOC103474461
Cullin 3; Belongs to the cullin family.
    
 0.748
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.