STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007065NFACT-R_1 domain-containing protein. (114 aa)    
Predicted Functional Partners:
tcf25
Transcription factor 25 (basic helix-loop-helix).
   
 0.981
ltn1
RING-type domain-containing protein.
   
 0.981
Nemf
Uncharacterized protein.
 
  
  0.973
ankzf1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
   
 0.890
LOC103470872
Ribosomal protein L26.
    
 0.874
rpl8
Ribosomal protein L8.
    
  0.868
rpl13a
Ribosomal protein L13a; Belongs to the universal ribosomal protein uL13 family.
   
  0.856
rplp0
Ribosomal protein, large, P0.
    
 0.847
rpl18a
Ribosomal protein L18a.
    
  0.844
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
  0.840
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.