STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gtf3c6TFIIIC_sub6 domain-containing protein. (150 aa)    
Predicted Functional Partners:
gtf3c3
General transcription factor IIIC, polypeptide 3.
     
  0.922
gtf3c2
General transcription factor IIIC, polypeptide 2, beta.
     
  0.922
GTF3C1
General transcription factor IIIC subunit 1.
     
  0.835
gtf3c4
General transcription factor IIIC, polypeptide 4.
     
  0.835
gtf3c5
General transcription factor IIIC, polypeptide 5.
     
  0.802
LOC103458137
TFIIB-type domain-containing protein.
     
  0.740
ENSPREP00000017888
BRF1 RNA polymerase III transcription initiation factor subunit b.
     
  0.740
bdp1
SANT domain-containing protein.
     
  0.700
znf512b
Zinc finger protein 512B.
     
  0.562
znf512
Zinc finger protein 512.
     
  0.562
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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