Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
slc4a1apSolute carrier family 4 member 1 adaptor protein. (745 aa)    
Predicted Functional Partners:
zrsr2
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
   
   0.929
snrpa1
Small nuclear ribonucleoprotein polypeptide A.
    
   0.916
osgep
Probable tRNA N6-adenosine threonylcarbamoyltransferase; Component of the EKC/KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. OSGEP likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity.
      
 0.867
phf5a
PHD finger protein 5A.
    
 
 0.822
ENSPREP00000007029
Uncharacterized protein.
   
   0.796
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
   
   0.796
dnajc8
DnaJ (Hsp40) homolog, subfamily C, member 8.
    
   0.779
Snrpf
Small nuclear ribonucleoprotein polypeptide F.
    
   0.779
exosc9
Exosome component 9.
    
   0.627
sf3b4
Splicing factor 3b, subunit 4.
    
   0.625
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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