STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
supt7lSPT7 like, STAGA complex gamma subunit. (434 aa)    
Predicted Functional Partners:
supt20h
SPT20 homolog, SAGA complex component.
    
 0.978
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.975
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.971
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.970
TADA1
Transcriptional adaptor 1.
    
 0.968
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.966
LOC103459886
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.948
ENSPREP00000022903
Uncharacterized protein.
    
 0.948
Trrap
FATC domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.948
tada2b
Transcriptional adapter.
    
 0.944
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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