STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462694Cholinergic receptor, nicotinic, alpha 3. (566 aa)    
Predicted Functional Partners:
LOC103467111
Uncharacterized protein.
    
  0.681
chrna2
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
    
  0.681
LYPD6
LY6/PLAUR domain containing 6.
    
 0.661
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
   
 0.619
LOC103464222
Cholinergic receptor, nicotinic, beta polypeptide 3a.
   
 0.611
LOC103462687
Cholinergic receptor, nicotinic, alpha 5.
   
 0.611
LOC103471384
Cholinergic receptor, nicotinic, beta 3b (neuronal); Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 0.611
LOC103464217
Uncharacterized protein.
   
  0.474
chrna7
Cholinergic receptor, nicotinic, alpha 7 (neuronal).
   
  0.474
LOC103471386
Uncharacterized protein.
   
  0.474
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.