STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466684Uncharacterized protein. (855 aa)    
Predicted Functional Partners:
LOC103477053
Uncharacterized protein.
  
 0.709
LOC103471147
Catenin (cadherin-associated protein), alpha 1.
   
 0.647
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.647
ENSPREP00000028495
Uncharacterized protein.
   
 0.647
fat1
FAT atypical cadherin 1a.
   
 
0.589
LOC103465658
Uncharacterized protein.
  
  
 
0.570
LOC103459828
Uncharacterized protein.
  
  
 
0.552
apc2
APC regulator of WNT signaling pathway 2.
     
 0.543
apc
APC regulator of WNT signaling pathway.
     
 0.543
ENSPREP00000000069
Si:dkey-30k22.7.
     
 
0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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