Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tada2bTranscriptional adapter. (419 aa)    
Predicted Functional Partners:
tada3
Transcriptional adaptor 3 (NGG1 homolog, yeast)-like.
    
 0.999
taf10
TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.999
LOC103459886
TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.998
sgf29
SAGA complex associated factor 29.
    
 0.997
supt7l
SPT7 like, STAGA complex gamma subunit.
    
 0.996
taf6l
TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor.
    
 0.994
supt3h
SPT3 homolog, SAGA and STAGA complex component.
    
 0.994
supt20h
SPT20 homolog, SAGA complex component.
    
 0.994
TADA1
Transcriptional adaptor 1.
    
 0.993
Taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
    
 0.992
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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