STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007154Myozenin 2b. (176 aa)    
Predicted Functional Partners:
csrp3
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
  
 0.850
LOC103470120
SET and MYND domain containing 1b.
   
  
 0.769
MYOM3
Myomesin 3.
   
  
 0.727
apobec2
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b.
   
    0.670
ENSPREP00000018298
Uncharacterized protein.
   
  
 0.663
ENSPREP00000033843
Small muscle protein X-linked.
   
  
 0.643
nrap
Nebulin-related anchoring protein.
   
  
 0.617
actn3
Actinin alpha 3b.
   
 
 0.603
LOC103476717
Actinin, alpha 2b.
   
 
 0.603
actn1
Actinin, alpha 1.
   
 
 0.603
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.