STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475992Matrix metallopeptidase 14a (membrane-inserted). (562 aa)    
Predicted Functional Partners:
mmp2
Matrix metallopeptidase 2.
  
 
0.937
LOC103478877
Matrix metallopeptidase 14b (membrane-inserted).
  
  
 
0.901
LOC103468846
TIMP metallopeptidase inhibitor 2b.
   
 0.616
LOC103481516
TIMP metallopeptidase inhibitor 2a.
   
 0.606
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.605
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
    
 0.506
LOC103462559
Furin (paired basic amino acid cleaving enzyme) a; Belongs to the peptidase S8 family.
    
 0.488
furin
Furin (paired basic amino acid cleaving enzyme) b; Belongs to the peptidase S8 family.
    
 0.488
LOC103459210
Decorin; May affect the rate of fibrils formation.
   
 0.439
LOC103466132
CD44 molecule (Indian blood group) b.
    
 0.438
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.