STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103475992Matrix metallopeptidase 14a (membrane-inserted). (562 aa)    
Predicted Functional Partners:
mmp2
Matrix metallopeptidase 2.
  
0.929
LOC103478877
Matrix metallopeptidase 14b (membrane-inserted).
  
  
 
0.901
LOC103468846
TIMP metallopeptidase inhibitor 2b.
   
 0.713
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.631
LOC103481516
TIMP metallopeptidase inhibitor 2a.
   
 0.620
creld1
Cysteine-rich with EGF-like domains 1b.
      
 0.532
cers2
Ceramide synthase 2b.
      
 0.525
nox5
NADPH oxidase, EF-hand calcium binding domain 5.
   
  
 0.477
LOC103475007
Lysophosphatidic acid receptor 6a; Belongs to the G-protein coupled receptor 1 family.
      
 0.473
timp4
TIMP metallopeptidase inhibitor 4, tandem duplicate 1.
    
 0.455
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.