STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC108166548Arrestin_C domain-containing protein. (477 aa)    
Predicted Functional Partners:
LOC103475974
Thioredoxin; Belongs to the thioredoxin family.
    
 0.568
LOC103475976
Thioredoxin; Belongs to the thioredoxin family.
    
 0.568
ENSPREP00000006378
Thioredoxin domain-containing protein.
    
 0.568
ENSPREP00000018176
Uncharacterized protein.
    
 0.532
ENSPREP00000021306
Si:dkeyp-44d3.5.
    
 0.532
yap1
Yes-associated protein 1.
    
 
 0.485
eef2k
Eukaryotic elongation factor 2 kinase.
      
 0.463
bbox1
Butyrobetaine (gamma), 2-oxoglutarate dioxygenase (gamma-butyrobetaine hydroxylase) 1.
      
 0.462
LOC103466144
Zgc:123278.
   
 
 0.439
tsg101
Tumor susceptibility 101a.
   
 
 0.439
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.