STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103459291Uncharacterized protein. (1299 aa)    
Predicted Functional Partners:
LOC103466742
Uncharacterized protein.
    
  0.634
terf1
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
  0.632
terf2ip
BRCT domain-containing protein.
    
  0.620
pot1
Telo_bind domain-containing protein.
    
  0.618
terf2
HTH myb-type domain-containing protein.
    
  0.586
ten1
TEN1 subunit of CST complex.
     
  0.578
LOC103475985
TERF1 (TRF1)-interacting nuclear factor 2.
     
 
0.540
tcf20
Transcription factor 20.
  
  0.538
LOC103480795
Uncharacterized protein.
  
 
   0.526
LOC103471420
Si:ch211-168f7.5.
  
     0.494
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.