STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479015Fibrinogen C-terminal domain-containing protein. (471 aa)    
Predicted Functional Partners:
LOC103479556
Insulin-like growth factor binding protein 1b.
   
 
 0.602
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
   
  
 0.602
coro2b
Coronin; Belongs to the WD repeat coronin family.
      
 0.592
serpinc1
Serpin peptidase inhibitor, clade C (antithrombin), member 1; Belongs to the serpin family.
   
 
 0.553
tie1
Tyrosine kinase with immunoglobulin-like and EGF-like domains 1.
   
 0.478
kansl2
KAT8 regulatory NSL complex subunit 2.
    
 0.472
mcrs1
Microspherule protein 1.
    
 0.467
apob
Apolipoprotein Ba.
   
  
 0.445
LOC103457447
Apolipoprotein Bb, tandem duplicate 2.
   
  
 0.445
ENSPREP00000010257
Uncharacterized protein.
   
  
 0.445
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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