Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Nr2f1Nuclear receptor subfamily 2, group F, member 1a. (360 aa)    
Predicted Functional Partners:
bola1
BolA family member 1; Belongs to the BolA/IbaG family.
      
 0.771
ano8
Anoctamin.
      
 0.758
LOC103463294
Plasmalemma vesicle associated protein b.
    
 0.676
FABP7
Fatty acid binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 0.613
LOC103479149
Uncharacterized protein.
    
 0.605
LOC103457094
Uncharacterized protein.
    
 
 0.600
LOC103479148
Anoctamin.
      
 0.591
ncor1
Nuclear receptor corepressor 1.
    
 0.555
LOC103458738
FABP domain-containing protein; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 0.545
LOC103458739
Fatty acid binding protein 7, brain, a; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 0.545
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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