STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103477835Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4b. (204 aa)    
Predicted Functional Partners:
LOC103468460
E1A binding protein p300 b.
    
 0.860
LOC103482005
E1A binding protein p300 a.
    
 0.860
LOC103464091
CREB binding protein a.
    
 0.845
crebbp
CREB binding protein b.
    
 0.845
creg1
Cellular repressor of E1A-stimulated genes 1; Belongs to the CREG family.
      
 0.654
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
    
 0.652
nrg4
EGF-like domain-containing protein.
      
 0.602
tfap2e
Transcription factor AP-2 epsilon.
    
 0.593
tfap2b
Transcription factor AP-2 beta.
    
 0.593
tfap2c
Transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma).
    
 0.593
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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