STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrpl46Mitochondrial ribosomal protein L46. (291 aa)    
Predicted Functional Partners:
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.996
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.996
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.996
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.995
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 
 0.995
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
   0.995
Mrpl21
Mitochondrial ribosomal protein L21.
   
 
 0.995
mrpl2
Mitochondrial ribosomal protein L2.
   
 
 0.994
mrpl43
Mitochondrial ribosomal protein L43.
   
 
 0.994
mrpl15
Mitochondrial ribosomal protein L15.
   
 
 0.993
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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