STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrpl46Mitochondrial ribosomal protein L46. (291 aa)    
Predicted Functional Partners:
mrpl55
Zgc:171480.
   
 0.994
mrpl40
Mitochondrial ribosomal protein L40.
   
 
 0.992
mrpl47
Mitochondrial ribosomal protein L47.
   
 0.992
mrpl12
Mitochondrial ribosomal protein L12.
   
 0.990
mrpl2
Mitochondrial ribosomal protein L2.
   
 0.990
mrpl16
Mitochondrial ribosomal protein L16.
   
 0.990
mrpl15
Mitochondrial ribosomal protein L15.
   
 0.988
ndufab1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.988
Mrpl21
Mitochondrial ribosomal protein L21.
   
 0.988
mrps11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.987
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.