STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cpmCarboxypeptidase M. (456 aa)    
Predicted Functional Partners:
cpd
Carboxypeptidase D, a.
    
   0.791
yeats4
YEATS domain containing 4.
      
 0.658
prep
Prolyl endopeptidase.
      
 0.608
smo
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
      
 0.603
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
  
 0.591
gak
Cyclin G associated kinase.
     
  0.521
spryd4
SPRY domain containing 4.
      
 0.514
LOC103476193
Protein phosphatase 1, regulatory (inhibitor) subunit 14Aa.
      
 0.502
LOC103459963
Bradykinin receptor B1; Belongs to the G-protein coupled receptor 1 family.
      
 0.478
frs3
Fibroblast growth factor receptor substrate 3.
   
 
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.