STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462181Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (455 aa)    
Predicted Functional Partners:
aco1
Aconitase 1, soluble; Belongs to the aconitase/IPM isomerase family.
  
 0.988
ACO2
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.987
LOC103481996
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.987
idh3a
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.985
LOC103466577
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.985
ogdh
Oxoglutarate (alpha-ketoglutarate) dehydrogenase b (lipoamide).
   
 0.982
ENSPREP00000026406
Oxoglutarate dehydrogenase.
   
 0.982
idh3b
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.978
idh3g
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
 0.978
idh1
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
  
0.973
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.