STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103460636Uncharacterized protein. (663 aa)    
Predicted Functional Partners:
LOC103475422
Uncharacterized protein.
  
     0.525
Lmtk3
Si:dkey-40m6.8.
  
     0.505
LOC103479233
Uncharacterized protein.
  
     0.496
LOC103466383
Uncharacterized protein.
  
     0.488
knl1
Uncharacterized protein.
  
     0.488
LOC103481754
Uncharacterized protein.
  
     0.466
LOC103475507
Microtubule associated tumor suppressor candidate 2a.
  
     0.461
LOC103473459
Uncharacterized protein.
  
     0.444
LOC103476183
PH domain-containing protein.
  
     0.429
LOC103463874
Cadherin 24, type 2a; Cadherins are calcium-dependent cell adhesion proteins.
  
     0.424
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.