STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103462180Zinc finger protein 710b. (752 aa)    
Predicted Functional Partners:
bcl7b
BAF chromatin remodeling complex subunit BCL7B b.
     
 0.620
rps6kl1
Ribosomal protein S6 kinase-like 1.
    
 
 0.608
osbpl9
Oxysterol-binding protein; Belongs to the OSBP family.
   
 
 0.601
naa35
N(alpha)-acetyltransferase 35, NatC auxiliary subunit.
   
  
 0.596
rexo4
REX4 homolog, 3'-5' exonuclease.
    
 
 0.593
pold1
DNA polymerase.
   
 
 0.556
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 0.507
dalrd3
DALR anticodon binding domain containing 3.
    
 
 0.505
LOC103480204
Galectin.
    
 
 0.499
hhex
Homeobox domain-containing protein.
   
 
 0.484
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.