STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX21Sorting nexin family member 21. (457 aa)    
Predicted Functional Partners:
ENSPREP00000024566
Uncharacterized protein.
   
 
 0.726
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
    
 0.608
pxk
PX domain containing serine/threonine kinase.
      
 0.604
KIF16B
Kinesin family member 16B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.603
lrrk1
Uncharacterized protein.
    
   0.594
snx15
Sorting nexin 15.
    
 0.545
snx13
Sorting nexin 13.
      
 0.532
sh3pxd2b
SH3 and PX domains 2B.
      
 0.532
snx2
Sorting nexin 2.
      
 0.532
snx16
Sorting nexin 16.
      
 0.503
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.