STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbxo33F-box protein 33. (490 aa)    
Predicted Functional Partners:
cul1
Cullin 1b; Belongs to the cullin family.
   
 
 0.655
LRRC29
Leucine rich repeat containing 29.
      
 0.549
fbxl15
F-box and leucine-rich repeat protein 15.
      
 0.549
Pacrg
PARK2 co-regulated.
      
 0.549
wdr47
WD repeat domain 47a.
      
 0.549
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
  
 
 
 0.489
fbxl20
F-box and leucine-rich repeat protein 20.
      
 0.470
cip2a
Cell proliferation regulating inhibitor of protein phosphatase 2A.
      
 0.468
LOC103479391
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 
 0.440
LOC103474461
Cullin 3; Belongs to the cullin family.
   
 
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.