STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007343Uncharacterized protein. (595 aa)    
Predicted Functional Partners:
LOC103475119
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.992
tgfb3
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.964
TGFB3
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.964
LOC103482297
Negative regulator of reactive oxygen species.
  
  
 
0.915
ENSPREP00000021441
Leucine rich repeat containing 32.
  
  
 
0.913
tgfb2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.912
itgb8
Integrin beta; Belongs to the integrin beta chain family.
   
 0.614
dcbld2
Discoidin, CUB and LCCL domain containing 2.
      
 0.592
med22
Mediator complex subunit 22.
   
  
 0.578
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
      
 0.515
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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