STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
kcng3Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family. (422 aa)    
Predicted Functional Partners:
kcnv1
BTB domain-containing protein; Belongs to the potassium channel family.
    
  0.834
LOC103464606
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.806
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.796
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.758
TMEM43
Uncharacterized protein.
      
 0.745
rrp36
Ribosomal RNA processing 36.
      
 0.730
ccdc36
Uncharacterized protein.
      
 0.724
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.722
pkdcc
Protein kinase domain containing, cytoplasmic b.
      
 0.710
trappc6a
Trafficking protein particle complex 6b-like.
      
 0.681
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.