STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fam118bFamily with sequence similarity 118 member B. (358 aa)    
Predicted Functional Partners:
Clg18h11orf95
Si:dkey-106g10.7.
   
 0.637
rhbdd3
Rhomboid domain containing 3.
    
 
 0.578
bbs9
Bardet-Biedl syndrome 9.
    
 0.555
LOC103458439
Receptor expression-enhancing protein.
    
 
 0.481
pld6
Phospholipase D family, member 6.
   
  
 0.477
ENSPREP00000026079
Integrator complex subunit 4.
      
 0.450
gak
Cyclin G associated kinase.
    
 0.445
tmem39a
Transmembrane protein 39A.
      
 0.424
tmem39b
Transmembrane protein 39B.
      
 0.424
Ttc38
Uncharacterized protein.
      
 0.422
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.