STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007364USP domain-containing protein. (162 aa)    
Predicted Functional Partners:
rce1
Ras converting CAAX endopeptidase 1a.
     
 0.560
ENSPREP00000010801
Uncharacterized protein.
     
 0.560
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
  0.469
brms1l
Uncharacterized protein.
    
  0.469
trip12
Thyroid hormone receptor interactor 12.
      
 0.469
LOC103457806
BRMS1 like transcriptional repressor b.
    
  0.469
brms1
BRMS1 transcriptional repressor and anoikis regulator.
    
  0.469
usp10
Ubiquitin carboxyl-terminal hydrolase.
     
 0.462
CDC25B
Cell division cycle 25B.
   
 0.405
p2rx1
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel.
   
 0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.