STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000007384Ion_trans domain-containing protein. (477 aa)    
Predicted Functional Partners:
Itpr3
MIR domain-containing protein.
 
     0.941
ryr1
Ryanodine receptor 1b (skeletal).
 
  
 
 0.602
ENSPREP00000002057
Stromal interaction molecule 1b.
    
 0.518
LOC103474115
Stromal interaction molecule 1a.
    
 0.518
LOC103469248
Tromal interaction molecule 2a.
    
 0.518
stim2
Stromal interaction molecule 2b.
    
 0.518
LOC103465669
Link domain-containing protein.
    
 0.491
ENSPREP00000034115
Link domain-containing protein.
    
 0.491
ENSPREP00000034127
Murine retrovirus integration site 1 homolog.
    
 0.491
AHCYL1
Adenosylhomocysteinase like 1; Belongs to the adenosylhomocysteinase family.
    
 0.474
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.