STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rsu1Ras suppressor protein 1. (351 aa)    
Predicted Functional Partners:
LOC103461059
LIM and senescent cell antigen-like domains 2.
   
 0.953
LOC103461979
LIM and senescent cell antigen-like domains 2.
   
 0.953
ENSPREP00000031580
LIM zinc-binding domain-containing protein.
   
 0.953
ENSPREP00000018298
Uncharacterized protein.
   
 0.931
ILK
Integrin linked kinase.
   
 0.896
ilk
Uncharacterized protein.
   
 0.896
parvg
Parvin, gamma.
    
 0.856
parva
Parvin, alpha a.
    
 0.720
parvb
Parvin, beta.
    
 0.720
Alkbh6
AlkB homolog 6.
      
 0.681
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.