STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc66a3Solute carrier family 66 member 3. (208 aa)    
Predicted Functional Partners:
nol10
Nucleolar protein 10.
      
 0.762
oxa1l
OXA1L mitochondrial inner membrane protein.
      
 0.662
kcnf1
Potassium voltage-gated channel, subfamily F, member 1b; Belongs to the potassium channel family.
      
 0.647
ENSPREP00000009708
Potassium voltage-gated channel, subfamily F, member 1a; Belongs to the potassium channel family.
      
 0.647
dolpp1
Dolichyldiphosphatase 1.
   
  
 0.633
yipf4
Protein YIPF.
      
 0.611
LOC103476647
Uncharacterized protein.
   
  
 0.600
tmem41a
Transmembrane protein 41aa.
   
  
 0.600
rnf128
RING-type domain-containing protein.
   
  
 0.598
LOC103477100
Regulator of microtubule dynamics 2.
      
 0.588
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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