STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NUCB2Nucleobindin 2. (458 aa)    
Predicted Functional Partners:
LOC103469251
FAM20C golgi associated secretory pathway kinase a.
    
 0.727
cbln1
Cerebellin 1 precursor.
      
 0.603
LOC103463110
Kininogen 1.
      
 0.603
apln
Apelin.
      
 0.599
ENSPREP00000000234
Family with sequence similarity 20 member C, like.
    
 0.536
LOC103468551
Fam20C domain-containing protein.
    
 0.536
fam20a
FAM20A golgi associated secretory pathway pseudokinase.
     
  0.514
LOC103468167
Peptide YYa.
      
 0.503
LOC103481983
Peptide YYb.
      
 0.494
dennd2d
DENN/MADD domain containing 2Da.
      
 0.463
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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