STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pigfPhosphatidylinositol glycan anchor biosynthesis, class F. (219 aa)    
Predicted Functional Partners:
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 0.999
pigo
Phosphatidylinositol glycan anchor biosynthesis, class O.
    
 0.997
pigb
Mannosyltransferase.
     
 0.957
pigk
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
   
 
 0.957
pigt
Phosphatidylinositol glycan anchor biosynthesis, class T.
     
 0.946
pigs
Phosphatidylinositol glycan anchor biosynthesis, class S.
     
 0.925
gpaa1
Glycosylphosphatidylinositol anchor attachment 1.
   
 
 0.923
pigu
Phosphatidylinositol glycan anchor biosynthesis, class U.
     
 0.915
LOC103473139
Uncharacterized protein.
      
 0.885
dpm2
Dolichol phosphate-mannose biosynthesis regulatory protein; Regulatory subunit of the dolichol-phosphate mannose (DPM) synthase complex; essential for the ER localization. Belongs to the DPM2 family.
      
 0.791
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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