STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tm9sf4Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family. (218 aa)    
Predicted Functional Partners:
LOC103461178
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
 
     0.932
eef1aknmt
Methyltransferase like 13.
      
 0.617
plagl2
Pleiomorphic adenoma gene-like 2.
   
 
 0.582
tmed2
Transmembrane p24 trafficking protein 2.
   
 
 0.551
Ier5l
Uncharacterized protein.
      
 0.537
glg1
Golgi glycoprotein 1a.
   
  
 0.518
LOC103462926
Golgi glycoprotein 1b.
   
  
 0.518
hck
Tyrosine-protein kinase.
      
 0.514
plag1
Pleiomorphic adenoma gene 1.
   
 
 0.507
LOC103463777
Transmembrane p24 trafficking protein 5.
      
 0.502
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.