STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC103469260Parvalbumin 1; Belongs to the parvalbumin family. (108 aa)    
Predicted Functional Partners:
ENSPREP00000027150
Uncharacterized protein.
   
 0.545
ak9
Adenylate kinase 9.
    
 
 0.541
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.541
cask
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.541
ENSPREP00000014094
NDK domain-containing protein.
   
 
 0.526
ENSPREP00000028517
ANK_REP_REGION domain-containing protein.
    
 0.494
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
 0.489
phkg2
Phosphorylase kinase, gamma 2 (testis); Belongs to the protein kinase superfamily.
   
 0.450
phkg1
Phosphorylase kinase, gamma 1a (muscle); Belongs to the protein kinase superfamily.
   
 0.450
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.