STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ier3ip1Immediate early response 3 interacting protein 1. (86 aa)    
Predicted Functional Partners:
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
 
 0.694
wdr26
WD repeat domain 26b.
      
 0.647
yipf5
Protein YIPF.
   
 
 0.610
LOC103458978
Zgc:123321.
   
 
 0.610
LOC103480119
RNA binding motif protein 4.1.
      
 0.588
srrm1
Serine/arginine repetitive matrix 1.
      
 0.583
tmco1
Transmembrane and coiled-coil domains 1.
   
  
 0.577
mtmr10
Myotubularin related protein 10.
      
 0.569
selenos
Selenoprotein S.
   
 
 0.554
ebp
EBP cholestenol delta-isomerase.
      
 0.540
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.