STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ier3ip1Immediate early response 3 interacting protein 1. (86 aa)    
Predicted Functional Partners:
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
   0.522
wdr26
WD repeat domain 26b.
      
 0.470
mrps21
Mitochondrial ribosomal protein S21.
   
    0.452
yipf5
Protein YIPF.
   
 
 0.441
LOC103458978
Zgc:123321.
   
 
 0.441
selenos
Selenoprotein S.
   
 
 0.434
LOC103458072
Yip1 domain-containing protein.
      
 0.420
yipf4
Protein YIPF.
   
 
 0.419
tmem167b
Protein kish; Involved in the early part of the secretory pathway.
   
   0.405
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.