STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a4Solute carrier family 25 member 4; Belongs to the mitochondrial carrier (TC 2.A.29) family. (308 aa)    
Predicted Functional Partners:
VDAC2
Voltage dependent anion channel 2.
   
 0.945
LOC103476817
Voltage-dependent anion channel 2.
   
 0.945
LOC103473231
Zgc:56235.
   
 0.945
ppid
Peptidylprolyl isomerase D.
   
 0.934
ppif
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.900
LOC103476827
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.890
cs
Citrate synthase; Belongs to the citrate synthase family.
   
 0.711
slc25a3
Solute carrier family 25 member 3a; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.675
slc25a5
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.653
LOC103471639
Solute carrier family 25 member 6; Belongs to the mitochondrial carrier (TC 2.A.29) family.
  
  
 
0.653
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.